Detailed information of matrix profile MA1464.1

  1. Home
  2. Matrix > MA1464.1

Profile summary
Name: ARNT2
Matrix ID: MA1464.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25215497
Uniprot ID: Q9HBZ2  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 11781 9572 505 40622 0 84 651 14 18559 7892 ]
C [ 4265 4901 40622 122 40622 0 932 0 22063 12448 ]
G [ 28841 9525 115 532 0 40622 111 40622 3912 12031 ]
T [ 1951 40622 0 460 148 0 40622 971 7159 8251 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1464.1 MA1464 1 ARNT2 Homo sapiens
PAS domain factors Basic helix-loop-helix factors (bHLH)
MA1464.2 MA1464 2 ARNT2 Homo sapiens
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0853.1

ChIP-seq Centrality
-log(P-value): 844.743

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0853.1

ChIP-seq Centrality
-log(P-value): 816.111

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: