Detailed information of matrix profile MA0103.3

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Profile summary
Name: ZEB1
Matrix ID: MA0103.3
Class: Homeo domain factors
Family: HD-ZF factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8065305
Uniprot ID: P37275  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 3211 4685 114 19905 32 193 4 441 1982 4258 3490 ]
C [ 7998 5550 19195 0 19878 19257 501 178 9561 6117 6955 ]
G [ 5228 5179 158 223 97 649 355 19381 5178 6601 5828 ]
T [ 3692 4715 662 1 122 30 19269 129 3408 3153 3856 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0103.1 MA0103 1 ZEB1 Gallus gallus
HD-ZF factors Homeo domain factors
MA0103.2 MA0103 2 ZEB1 Homo sapiens
HD-ZF factors Homeo domain factors
MA0103.3 MA0103 3 ZEB1 Homo sapiens
HD-ZF factors Homeo domain factors
MA0103.4 MA0103 4 ZEB1 Homo sapiens
HD-ZF factors Homeo domain factors
     

-log(P-value) = 1227.33

TFFM details

TFFM ID: TFFM0127.2

ChIP-seq Centrality
-log(P-value): 1499.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0127.2

ChIP-seq Centrality
-log(P-value): 1497.19

TFFM detailed summary logos

Description:

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GC Content: