Detailed information of matrix profile MA0148.2

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Profile summary
Name: FOXA1
Matrix ID: MA0148.2
Class: Fork head/winged helix factors
Family: FOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 18798982
Uniprot ID: P55317  
Source: ChIP-seq
Comment:

Sequence logo

Frequency matrix

         
A [ 13 108 1 4 6 478 4 289 42 379 89 ]
C [ 1 7 7 7 3 12 808 106 369 7 125 ]
G [ 2 772 4 24 77 368 5 5 69 24 467 ]
T [ 876 7 885 862 811 38 79 496 414 482 211 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0148.1 MA0148 1 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
MA0148.2 MA0148 2 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
MA0148.3 MA0148 3 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
MA0148.4 MA0148 4 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
MA0148.5 MA0148 5 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: