Detailed information of matrix profile MA0262.1

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Profile summary
Name: mab-3
Matrix ID: MA0262.1
Class: DM-type intertwined zinc finger factors
Family: DMRT factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: EMSA
Validation: 9927589
Uniprot ID: O18214  
Source:
Comment: Class and TF information is inferred from the H. sapiens ortholog to mab-3, obtained from Ortho DB.

Sequence logo

Frequency matrix

         
A [ 76 86 0 0 0 0 0 0 13 62 50 29 8 ]
C [ 3 0 1 0 0 0 0 100 19 0 0 13 8 ]
G [ 13 0 0 100 0 0 100 0 67 11 6 22 10 ]
T [ 8 14 99 0 100 100 0 0 1 27 44 36 74 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0262.1 MA0262 1 mab-3 Caenorhabditis elegans
DMRT factors DM-type intertwined zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: