Detailed information of matrix profile MA0472.2

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Profile summary
Name: EGR2
Matrix ID: MA0472.2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 7891721
Uniprot ID: P11161  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 1157 0 295 6 24 0 2147 0 106 4 1731 ]
C [ 679 1551 0 1558 1554 1468 110 1573 0 1585 157 ]
G [ 94 28 3731 25 15 38 26 2 4034 20 542 ]
T [ 142 73 222 29 13 277 2 23 171 115 430 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0472.1 MA0472 1 Egr2 Mus musculus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0472.2 MA0472 2 EGR2 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0021.1

ChIP-seq Centrality
-log(P-value): 237.009

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0021.1

ChIP-seq Centrality
-log(P-value): 232.572

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: