Detailed information of matrix profile MA0480.1

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Profile summary
Name: Foxo1
Matrix ID: MA0480.1
Class: Fork head/winged helix factors
Family: FOX
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 10880363
Uniprot ID: Q9R1E0  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 468 127 87 0 0 0 0 0 1871 0 1072 ]
C [ 277 1279 1406 0 0 0 0 0 157 2007 573 ]
G [ 478 752 209 0 2490 0 0 287 0 0 71 ]
T [ 1267 332 788 2490 0 2490 2490 2203 462 483 774 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0480.1 MA0480 1 Foxo1 Mus musculus
FOX Fork head/winged helix factors
MA0480.2 MA0480 2 Foxo1 Mus musculus
FOX Fork head/winged helix factors
MA0480.3 MA0480 3 Foxo1 Mus musculus
FOX Fork head/winged helix factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0038.1

ChIP-seq Centrality
-log(P-value): 1183.91

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0038.1

ChIP-seq Centrality
-log(P-value): 1165.22

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: