Detailed information of matrix profile MA0493.1

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Profile summary
Name: Klf1
Matrix ID: MA0493.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 7682653
Uniprot ID: P46099  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 150 167 67 13 404 0 400 0 0 0 280 ]
C [ 76 40 396 461 118 526 0 526 526 508 35 ]
G [ 202 305 32 0 0 0 97 0 0 0 0 ]
T [ 98 14 31 52 4 0 29 0 0 18 211 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0493.1 MA0493 1 Klf1 Mus musculus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0493.2 MA0493 2 KLF1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0493.3 MA0493 3 KLF1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0055.1

ChIP-seq Centrality
-log(P-value): 209.606

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0055.1

ChIP-seq Centrality
-log(P-value): 222.114

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: