Detailed information of matrix profile MA0499.2

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Profile summary
Name: MYOD1
Matrix ID: MA0499.2
Class: Basic helix-loop-helix factors (bHLH)
Family: MyoD/ASC-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20412780
Uniprot ID: P15172  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 7175 9462 4549 349 32281 463 534 241 208 402 1808 9462 5687 ]
C [ 11279 7103 5622 33328 583 25275 32504 563 386 2555 19052 10485 11760 ]
G [ 8118 8444 21884 354 849 7336 932 366 33468 1699 4440 6202 7495 ]
T [ 7728 9291 2245 269 587 1226 330 33130 238 29644 9000 8151 9358 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0499.1 MA0499 1 Myod1 Mus musculus
MyoD/ASC-related factors Basic helix-loop-helix factors (bHLH)
MA0499.2 MA0499 2 MYOD1 Homo sapiens
MyoD/ASC-related factors Basic helix-loop-helix factors (bHLH)
MA0499.3 MA0499 3 MYOD1 Homo sapiens
MyoD/ASC-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0068.2

ChIP-seq Centrality
-log(P-value): 54540.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0068.2

ChIP-seq Centrality
-log(P-value): 54679.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: