Detailed information of matrix profile MA0525.2

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Profile summary
Name: TP63
Matrix ID: MA0525.2
Class: p53 domain factors
Family: p53-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17188034
Uniprot ID: Q9H3D4  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1586 2261 0 2246 692 0 14 97 649 112 993 2192 0 2151 75 0 49 701 ]
C [ 26 1 2533 0 33 0 85 1025 478 681 1 0 2788 0 617 0 202 2099 ]
G [ 997 185 0 76 0 4021 0 26 2070 1656 2132 48 0 1 8 3532 1 198 ]
T [ 115 21 0 4 2353 0 3025 1961 13 829 47 45 0 192 2823 0 3126 606 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0525.1 MA0525 1 TP63 Homo sapiens
p53-related factors p53 domain factors
MA0525.2 MA0525 2 TP63 Homo sapiens
p53-related factors p53 domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0120.1

ChIP-seq Centrality
-log(P-value): 10201.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0120.1

ChIP-seq Centrality
-log(P-value): 10111.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: