Detailed information of matrix profile MA0525.2

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Profile summary
Name: TP63
Matrix ID: MA0525.2
Class: p53 domain factors
Family: p53-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17188034
Uniprot ID: Q9H3D4  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 606 3126 0 2823 192 0 45 47 829 13 1961 3025 0 2353 4 0 21 115 ]
C [ 198 1 3532 8 1 0 48 2132 1656 2070 26 0 4021 0 76 0 185 997 ]
G [ 2099 202 0 617 0 2788 0 1 681 478 1025 85 0 33 0 2533 1 26 ]
T [ 701 49 0 75 2151 0 2192 993 112 649 97 14 0 692 2246 0 2261 1586 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0525.1 MA0525 1 TP63 Homo sapiens
p53-related factors p53 domain factors
MA0525.2 MA0525 2 TP63 Homo sapiens
p53-related factors p53 domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0120.1

ChIP-seq Centrality
-log(P-value): 10201.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0120.1

ChIP-seq Centrality
-log(P-value): 10111.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: