Detailed information of matrix profile MA0526.1

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Profile summary
Name: USF2
Matrix ID: MA0526.1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8943301
Uniprot ID: Q15853  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 3976 1495 0 13819 0 0 0 0 10453 0 2184 ]
C [ 2073 4490 13819 0 4863 0 0 0 745 9929 6633 ]
G [ 7125 1909 0 0 1370 13819 0 13819 2568 729 455 ]
T [ 645 5925 0 0 7586 0 13819 0 53 3161 4547 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0526.1 MA0526 1 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0526.2 MA0526 2 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0526.3 MA0526 3 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0526.4 MA0526 4 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0526.5 MA0526 5 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0123.1

ChIP-seq Centrality
-log(P-value): 10854.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0123.1

ChIP-seq Centrality
-log(P-value): 10911.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: