Detailed information of matrix profile MA0647.1

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Profile summary
Name: GRHL1
Matrix ID: MA0647.1
Class: Grainyhead domain factors
Family: Grainyhead-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18288204
Uniprot ID: Q9NZI5  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1345 2491 2491 2491 0 371 332 0 76 127 761 685 ]
C [ 472 109 3 1 2491 2491 52 1 4 186 537 289 ]
G [ 247 409 112 7 0 51 2491 2491 2 12 244 655 ]
T [ 427 418 62 28 0 221 200 0 2491 2491 2491 862 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0647.1 MA0647 1 GRHL1 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
MA0647.2 MA0647 2 GRHL1 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0754.1

ChIP-seq Centrality
-log(P-value): 6028.83

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0754.1

ChIP-seq Centrality
-log(P-value): 6235.33

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: