Detailed information of matrix profile MA0690.2

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Profile summary
Name: TBX21
Matrix ID: MA0690.2
Class: T-Box factors
Family: TBrain-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 16285859
Uniprot ID: Q9UL17  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 1570 499 10 375 3685 0 3685 8 179 145 489 ]
C [ 921 276 60 3685 37 3685 54 3685 3685 664 490 ]
G [ 1488 376 4 344 460 0 163 28 302 36 254 ]
T [ 3685 3685 3685 50 124 0 3 2 310 3685 2452 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0690.1 MA0690 1 TBX21 Homo sapiens
TBrain-related factors T-Box factors
MA0690.2 MA0690 2 TBX21 Homo sapiens
TBrain-related factors T-Box factors
MA0690.3 MA0690 3 TBX21 Homo sapiens
TBrain-related factors T-Box factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0767.1

ChIP-seq Centrality
-log(P-value): 3493.97

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0767.1

ChIP-seq Centrality
-log(P-value): 3583.43

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: