Detailed information of matrix profile MA0749.1

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Profile summary
Name: ZBED1
Matrix ID: MA0749.1
Class: C2H2 zinc finger factors
Family: BED zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12663651
Uniprot ID: O96006  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1153 441 3841 6 0 127 4 4 5326 6 5276 118 3123 ]
C [ 2613 22 15 8 5373 3 5357 4 9 4330 11 273 270 ]
G [ 591 56 2065 0 6 5979 0 6013 12 0 10 635 1876 ]
T [ 711 5321 8 5510 18 2 110 0 0 865 144 5055 608 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0749.1 MA0749 1 ZBED1 Homo sapiens
BED zinc finger factors C2H2 zinc finger factors
MA0749.2 MA0749 2 ZBED1 Homo sapiens
BED zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: