Detailed information of matrix profile MA0783.1

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Profile summary
Name: PKNOX2
Matrix ID: MA0783.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25233378
Uniprot ID: Q96KN3  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 37 1 1124 0 1169 7 39 0 3 10 11 1190 ]
C [ 0 6 3 1250 0 0 304 4 1 29 1265 1 ]
G [ 9 1389 13 0 1 1298 702 0 1370 5 6 21 ]
T [ 1192 0 6 9 4 118 0 1204 0 1167 3 9 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0783.1 MA0783 1 PKNOX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: