Detailed information of matrix profile MA0810.1

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Profile summary
Name: TFAP2A
Matrix ID: MA0810.1
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16420676
Uniprot ID: P05549  
Source: 23332764
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 678 838 15 0 10 197 1324 1697 191 5 101 1922 ]
C [ 1183 1906 4006 4006 2812 1653 1439 407 34 788 4006 434 ]
G [ 173 4006 229 10 221 831 1054 1873 4006 4006 468 979 ]
T [ 1971 147 0 33 963 1324 189 28 0 10 226 671 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0810.1 MA0810 1 TFAP2A Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
MA0810.2 MA0810 2 TFAP2A Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0112.1

ChIP-seq Centrality
-log(P-value): 4469.25

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0112.1

ChIP-seq Centrality
-log(P-value): 4263.98

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: