Detailed information of matrix profile MA0884.1

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Profile summary
Name: DUXA
Matrix ID: MA0884.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24278031
Uniprot ID: A6NLW8  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 189 92 108 1014 7 22 1014 417 620 5 12 1014 283 ]
C [ 283 52 3 5 10 47 116 193 125 11 359 111 194 ]
G [ 178 29 1014 1 7 56 344 392 394 6 5 285 313 ]
T [ 364 1014 0 0 1014 1014 23 12 136 1014 655 241 224 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0884.1 MA0884 1 DUXA Homo sapiens
Paired-related HD factors Homeo domain factors
MA0884.2 MA0884 2 DUXA Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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