Detailed information of matrix profile MA0893.1

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Profile summary
Name: GSX2
Matrix ID: MA0893.1
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q9BZM3  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 2836 1543 1147 6175 9508 663 840 9508 4398 3588 ]
C [ 2469 3895 4131 3332 458 344 811 298 1642 2288 ]
G [ 2083 2235 520 504 640 0 130 155 2235 1535 ]
T [ 2121 1835 5377 1446 712 9508 9508 796 1233 2097 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0893.1 MA0893 1 GSX2 Homo sapiens
HOX Homeo domain factors
MA0893.2 MA0893 2 GSX2 Homo sapiens
HOX Homeo domain factors
MA0893.3 MA0893 3 GSX2 Homo sapiens
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: