Detailed information of matrix profile MA0919.1

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Profile summary
Name: dsc-1
Matrix ID: MA0919.1
Class: Homeo domain factors
Family:
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis briggsae
Data Type: PBM
Validation: 18585360
Uniprot ID: A8X4D9  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 330 114 63 817 960 12 63 787 334 174 ]
C [ 199 405 138 53 12 16 66 13 146 296 ]
G [ 296 146 13 66 16 12 53 138 405 199 ]
T [ 174 334 787 63 12 960 817 63 114 330 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0919.1 MA0919 1 dsc-1 Caenorhabditis briggsae
Homeo domain factors
MA0919.2 MA0919 2 dsc-1 Caenorhabditis briggsae
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: