Detailed information of matrix profile MA1105.2

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Profile summary
Name: GRHL2
Matrix ID: MA1105.2
Class: Grainyhead domain factors
Family: Grainyhead-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20978075
Uniprot ID: Q6ISB3  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 14483 17842 36467 37065 503 34024 2824 642 1878 1752 7061 8868 ]
C [ 9741 6996 1147 712 40446 1543 581 987 2331 2000 9341 8528 ]
G [ 9161 10776 2646 2841 609 485 37226 39624 748 1220 7961 10536 ]
T [ 8493 6264 1618 1260 320 5826 1247 625 36921 36906 17515 13946 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1105.1 MA1105 1 GRHL2 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
MA1105.2 MA1105 2 GRHL2 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
MA1105.3 MA1105 3 GRHL2 Homo sapiens
Grainyhead-related factors Grainyhead domain factors
     

-log(P-value) = 2122.59

TFFM details

TFFM ID: TFFM0138.2

ChIP-seq Centrality
-log(P-value): 18530.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0138.2

ChIP-seq Centrality
-log(P-value): 4375.95

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: