Detailed information of matrix profile MA1147.1

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Profile summary
Name: NR4A2::RXRA
Matrix ID: MA1147.1
Class: Nuclear receptors with C4 zinc fingers
Family: NGFI-B-related receptors (NR4)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 7705655
Uniprot ID: P19793   P43354  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 288 498 20 51 46 7 592 248 2 70 926 157 40 5 104 ]
C [ 212 124 11 7 134 824 38 60 69 82 54 830 937 535 473 ]
G [ 371 348 924 804 128 31 343 87 5 836 17 2 4 23 180 ]
T [ 130 29 46 139 691 138 27 604 924 12 3 11 20 437 244 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1147.1 MA1147 1 NR4A2::RXRA Homo sapiens
NGFI-B-related receptors (NR4)::RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
MA1147.2 MA1147 2 NR4A2::RXRA Homo sapiens
NGFI-B-related receptors (NR4)::RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: