Detailed information of matrix profile MA1333.1

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Profile summary
Name: BEH3
Matrix ID: MA1333.1
Class: Basic helix-loop-helix factors (bHLH)
Family: BES/BZR
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15681342
Uniprot ID: O49404  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 3 179 0 590 0 1 1 0 51 60 239 ]
C [ 319 28 589 0 590 0 0 0 74 140 91 ]
G [ 43 383 0 0 0 589 0 590 60 338 179 ]
T [ 225 0 1 0 0 0 589 0 405 52 81 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1333.1 MA1333 1 BEH3 Arabidopsis thaliana
BES/BZR Basic helix-loop-helix factors (bHLH)
MA1333.2 MA1333 2 BEH3 Arabidopsis thaliana
BES/BZR Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0266.1

ChIP-seq Centrality
-log(P-value): 2198.45

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0266.1

ChIP-seq Centrality
-log(P-value): 2219.98

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: