Detailed information of matrix profile MA1419.1

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Profile summary
Name: IRF4
Matrix ID: MA1419.1
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25896227
Uniprot ID: Q15306  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 10448 364 350 45331 45331 45331 187 27 57 45331 45331 45331 829 1377 25202 ]
C [ 18876 45331 66 124 8 6 45331 45331 6 46 11 15 45331 17589 4640 ]
G [ 2105 87 45331 91 25 4 593 4 45331 7 23 4 4251 253 5644 ]
T [ 13901 5937 31 112 444 8 497 3801 3 5 1002 13 80 27742 9846 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1419.1 MA1419 1 IRF4 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
MA1419.2 MA1419 2 IRF4 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0182.1

ChIP-seq Centrality
-log(P-value): 1097.28

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0182.1

ChIP-seq Centrality
-log(P-value): 1125.17

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: