Detailed information of matrix profile MA1536.1

  1. Home
  2. Matrix > MA1536.1

Profile summary
Name: NR2C2
Matrix ID: MA1536.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 11478808
Uniprot ID: P49116  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 6236 10232 0 0 0 0 18628 5065 ]
C [ 3111 719 236 0 0 18628 0 4757 ]
G [ 6420 8395 18628 18628 1588 1643 6639 3684 ]
T [ 2861 0 1341 4790 18628 4406 0 5122 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1536.1 MA1536 1 NR2C2 Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
MA1536.2 MA1536 2 NR2C2 Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0867.1

ChIP-seq Centrality
-log(P-value): 2673.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0867.1

ChIP-seq Centrality
-log(P-value): 2641.24

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: