Detailed information of matrix profile UN0112.1

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Profile summary

Name: ATF6B
Matrix ID: UN0112.1
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q99941  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 30 34 192 9 715 0 6 0 38 40 23 715 ]
C [ 281 9 715 715 7 715 7 14 36 4 715 53 ]
G [ 22 715 4 62 15 0 715 16 715 715 0 8 ]
T [ 434 45 16 8 1 0 0 715 16 210 26 71 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0110.1 UN0110 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0111.1 UN0111 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0112.1 UN0112 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0110.2 UN0110 2 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0111.2 UN0111 2 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: