Detailed information of matrix profile UN0271.1

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Profile summary

Name: gtaJ
Matrix ID: UN0271.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: UNVALIDATED
Taxon: Dictyostelium
Species: Dictyostelium discoideum
Data Type: PBM
Validation:
Uniprot ID: Q54TE3  
Source: 31133749
Comment:

Sequence logo

Frequency matrix

         
A [ 125 698 13 959 25 5 45 341 269 350 ]
C [ 357 106 5 15 13 876 32 134 243 175 ]
G [ 134 134 912 0 23 46 230 404 171 221 ]
T [ 383 60 67 24 937 70 692 119 315 252 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0271.1 UN0271 1 gtaJ Dictyostelium discoideum
C4-GATA-related Other C4 zinc finger-type factors
UN0271.2 UN0271 2 gtaJ Dictyostelium discoideum
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: