Detailed information of matrix profile UN0410.1

  1. Home
  2. Matrix > UN0410.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: STKL2
Matrix ID: UN0410.1
Class: GeBP/Storekeeper
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: O23077  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 492 552 88 191 8 14 1000 0 0 0 730 277 412 ]
C [ 128 52 541 622 56 8 0 0 1000 919 2 213 30 ]
G [ 103 144 81 105 0 24 0 0 0 0 201 52 20 ]
T [ 277 252 291 83 936 954 0 1000 0 81 68 458 537 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0410.1 UN0410 1 STKL2 Arabidopsis thaliana
GeBP/Storekeeper
UN0410.2 UN0410 2 STKL2 Arabidopsis thaliana
Storekeeper Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: