Detailed information of matrix profile UN0410.1

  1. Home
  2. Matrix > UN0410.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: STKL2
Matrix ID: UN0410.1
Class: GeBP/Storekeeper
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: O23077  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 537 458 68 81 0 1000 0 954 936 83 291 252 277 ]
C [ 20 52 201 0 0 0 0 24 0 105 81 144 103 ]
G [ 30 213 2 919 1000 0 0 8 56 622 541 52 128 ]
T [ 412 277 730 0 0 0 1000 14 8 191 88 552 492 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0410.1 UN0410 1 STKL2 Arabidopsis thaliana
GeBP/Storekeeper
UN0410.2 UN0410 2 STKL2 Arabidopsis thaliana
Storekeeper Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: