Detailed information of matrix profile UN0420.1

  1. Home
  2. Matrix > UN0420.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: GLYMA-08G357600
Matrix ID: UN0420.1
Class: B3
Family: ABI3
Collection: UNVALIDATED
Taxon: Plants
Species: Glycine max
Data Type: ChIP-seq
Validation:
Uniprot ID: I1KZD3  
Source: GSE101648
Comment:

Sequence logo

Frequency matrix

         
A [ 1134 3654 17 0 217 302 200 288 1824 1670 ]
C [ 2600 593 6396 1 547 191 134 6073 1368 1654 ]
G [ 1008 1107 0 6412 124 5839 525 0 1558 1209 ]
T [ 1671 1059 0 0 5525 81 5554 52 1663 1880 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0420.1 UN0420 1 GLYMA-08G357600 Glycine max
ABI3 B3
UN0420.2 UN0420 2 GLYMA-08G357600 Glycine max
LAV B3
     

-log(P-value) = 960.496

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: