Detailed information of matrix profile UN0442.1

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Profile summary

Name: Atf4-5
Matrix ID: UN0442.1
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3V9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 254 281 302 271 275 225 173 588 10 19 924 9 157 26 150 847 50 219 204 262 245 249 ]
C [ 239 220 203 227 222 143 180 220 18 37 11 832 12 43 763 35 215 437 416 244 257 254 ]
G [ 267 244 239 254 248 419 438 170 7 817 34 11 821 13 62 63 298 171 150 221 226 207 ]
T [ 240 255 255 247 256 213 209 22 965 127 30 149 10 917 25 55 437 173 230 273 273 290 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0442.1 UN0442 1 Atf4-5 Ciona intestinalis
Jun-related Basic leucine zipper factors (bZIP)
UN0442.2 UN0442 2 Atf4-5 Ciona intestinalis
Jun-related Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: