Detailed information of matrix profile UN0458.1

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Profile summary

Name: Nkx2-3-5-6
Matrix ID: UN0458.1
Class: Homeo domain factors
Family: NK
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 233 240 251 234 140 224 73 918 984 5 47 37 38 186 206 232 234 238 257 271 ]
C [ 184 197 196 202 273 110 281 4 3 3 8 4 197 267 254 261 249 237 234 228 ]
G [ 289 286 282 253 274 92 139 62 7 976 16 949 630 225 189 217 214 209 214 213 ]
T [ 294 278 270 311 313 574 507 16 5 15 929 10 135 321 351 291 303 316 294 287 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0458.1 UN0458 1 Nkx2-3-5-6 Ciona intestinalis
NK Homeo domain factors
UN0458.2 UN0458 2 Nkx2-3-5-6 Ciona intestinalis
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: