Detailed information of matrix profile UN0458.2

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Profile summary

Name: Nkx2-3-5-6
Matrix ID: UN0458.2
Class: Homeo domain factors
Family: NK
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 224 73 918 984 5 47 37 38 ]
C [ 110 281 4 3 3 8 4 197 ]
G [ 92 139 62 7 976 16 949 630 ]
T [ 574 507 16 5 15 929 10 135 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0458.1 UN0458 1 Nkx2-3-5-6 Ciona intestinalis
NK Homeo domain factors
UN0458.2 UN0458 2 Nkx2-3-5-6 Ciona intestinalis
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: