Detailed information of matrix profile UN0473.1

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Profile summary

Name: xBP-b
Matrix ID: UN0473.1
Class: Basic leucine zipper factors (bZIP)
Family: XBP-1-related factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 185 202 288 237 302 276 136 918 4 7 8 68 25 316 301 132 407 286 154 139 ]
C [ 176 216 174 193 226 304 345 13 952 2 14 32 57 221 283 390 135 419 270 154 ]
G [ 321 236 337 328 215 140 203 39 11 986 7 846 642 189 170 126 240 156 470 270 ]
T [ 318 346 200 242 257 280 316 30 33 5 972 54 276 274 246 351 218 139 106 437 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0473.1 UN0473 1 xBP-b Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
UN0473.2 UN0473 2 xBP-b Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: