Detailed information of matrix profile UN0473.1

  1. Home
  2. Matrix > UN0473.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: xBP-b
Matrix ID: UN0473.1
Class: Basic leucine zipper factors (bZIP)
Family: XBP-1-related factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 437 106 139 218 351 246 274 276 54 972 5 33 30 316 280 257 242 200 346 318 ]
C [ 270 470 156 240 126 170 189 642 846 7 986 11 39 203 140 215 328 337 236 321 ]
G [ 154 270 419 135 390 283 221 57 32 14 2 952 13 345 304 226 193 174 216 176 ]
T [ 139 154 286 407 132 301 316 25 68 8 7 4 918 136 276 302 237 288 202 185 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0473.1 UN0473 1 xBP-b Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
UN0473.2 UN0473 2 xBP-b Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: