Detailed information of matrix profile UN0476.1

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Profile summary

Name: ZF-C2H2-1
Matrix ID: UN0476.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K9  
Source: 31267468
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 542 518 89 324 263 423 211 972 4 4 934 55 126 140 415 294 344 290 201 253 ]
C [ 78 98 37 61 341 99 362 3 21 7 4 77 99 265 401 269 127 368 432 325 ]
G [ 246 238 110 587 41 114 40 12 967 7 12 746 678 469 97 251 362 174 105 163 ]
T [ 134 146 764 28 354 365 387 12 8 982 50 123 97 126 86 186 168 169 263 259 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0476.1 UN0476 1 ZF-C2H2-1 Ciona intestinalis
C2H2 zinc finger factors
UN0476.2 UN0476 2 ZF-C2H2-1 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: