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33 profile(s) found

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ID Name Species Class Family Logo
MA0462.1 BATF::JUN Homo sapiens
 Basic leucine zipper factors (bZIP) B-ATF-related factors::Jun-related
MA0462.2 BATF::JUN Homo sapiens
 Basic leucine zipper factors (bZIP) B-ATF-related factors::Jun-related
MA0462.3 BATF::JUN Homo sapiens
 Basic leucine zipper factors (bZIP) B-ATF-related factors::Jun-related
MA0604.1 Atf1 Mus musculus
 Basic leucine zipper factors (bZIP) CREB-related factors
MA0605.1 Atf3 Mus musculus
 Basic leucine zipper factors (bZIP) Fos-related
MA0605.2 ATF3 Homo sapiens
 Basic leucine zipper factors (bZIP) Fos-related
MA0605.3 ATF3 Homo sapiens
 Basic leucine zipper factors (bZIP) Fos-related
MA0692.1 TFEB Homo sapiens
 Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA0692.2 TFEB Homo sapiens
 Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA0833.1 ATF4 Homo sapiens
 Basic leucine zipper factors (bZIP) ATF-4-related factors
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.