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ID Name Species Class Family Logo
MA1079.3 WRKY21 Arabidopsis thaliana
 GCM domain factors WRKY
MA1080.1 WRKY23 Arabidopsis thaliana
 GCM domain factors WRKY
MA1081.1 WRKY25 Arabidopsis thaliana
 GCM domain factors WRKY
MA1081.2 WRKY25 Arabidopsis thaliana
 GCM domain factors WRKY
MA1081.3 WRKY25 Arabidopsis thaliana
 GCM domain factors WRKY
MA1083.1 WRKY30 Arabidopsis thaliana
 GCM domain factors WRKY
MA1083.2 WRKY30 Arabidopsis thaliana
 GCM domain factors WRKY
MA1083.3 WRKY30 Arabidopsis thaliana
 GCM domain factors WRKY
MA1084.1 WRKY38 Arabidopsis thaliana
 GCM domain factors WRKY
MA1085.1 WRKY40 Arabidopsis thaliana
 GCM domain factors WRKY
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.