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ID Name Species Class Family Logo
MA0105.2 NFKB1 Homo sapiens
 Rel homology region (RHR) factors NF-kappaB-related factors
MA0105.3 NFKB1 Homo sapiens
 Rel homology region (RHR) factors NF-kappaB-related factors
MA0105.4 NFKB1 Homo sapiens
 Rel homology region (RHR) factors NF-kappaB-related factors
MA0106.1 TP53 Homo sapiens
 p53 domain factors p53-related factors
MA0106.2 TP53 Homo sapiens
 p53 domain factors p53-related factors
MA0106.3 TP53 Homo sapiens
 p53 domain factors p53-related factors
MA0107.1 RELA Homo sapiens
 Rel homology region (RHR) factors NF-kappaB-related factors
MA0110.1 ATHB-5 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA0110.2 ATHB-5 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA0110.3 ATHB-5 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.