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138 profile(s) found

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ID Name Species Class Family Logo
MA1265.1 ERF015 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA1265.2 ERF015 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA1265.3 ERF015 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA1377.1 PLT1 Arabidopsis thaliana
 AP2/EREBP AP2
MA1377.2 PLT1 Arabidopsis thaliana
 AP2/EREBP AP2
MA1424.1 ERF019 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA1424.2 ERF019 Arabidopsis thaliana
 AP2/EREBP ERF/DREB
MA1511.1 KLF10 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1511.2 KLF10 Homo sapiens
 C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1639.1 MEIS1 Homo sapiens
 Homeo domain factors TALE-type homeo domain factors
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.