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ID Name Species Class Family Logo
MA1180.2 MYB3R4 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA1181.1 MYB113 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA1181.2 MYB113 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA1182.1 RVE8 Arabidopsis thaliana
 Tryptophan cluster factors MYB-related
MA1182.2 RVE8 Arabidopsis thaliana
 Tryptophan cluster factors MYB-related
MA1183.1 RVE6 Arabidopsis thaliana
 Tryptophan cluster factors MYB-related
MA1183.2 RVE6 Arabidopsis thaliana
 Tryptophan cluster factors MYB-related
MA1184.1 RVE1 Arabidopsis thaliana
 Tryptophan cluster factors MYB-related
MA1184.2 RVE1 Arabidopsis thaliana
 Tryptophan cluster factors MYB-related
MA1185.1 LHY Arabidopsis thaliana
 Tryptophan cluster factors MYB-related
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.