Search profile(s)

  1. Home
  2. Search

2470 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA1206.1 ARF2 Arabidopsis thaliana
 B3 ARF
MA1206.2 ARF2 Arabidopsis thaliana
 B3 ARF
MA1208.1 GT-2 Arabidopsis thaliana
 Tryptophan cluster factors Trihelix
MA1208.2 GT-2 Arabidopsis thaliana
 Tryptophan cluster factors Trihelix
MA1209.1 ATHB-20 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA1209.2 ATHB-20 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA1210.1 HAT22 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA1210.2 HAT22 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA1210.3 HAT22 Arabidopsis thaliana
 Homeo domain factors HD-ZIP
MA1211.1 ATHB-X Arabidopsis thaliana
 Homeo domain factors HD-ZIP
Showing 10 profiles of page 128 from 247 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.