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ID Name Species Class Family Logo
MA1289.1 TCP3 Arabidopsis thaliana
 TCP
MA1289.2 TCP3 Arabidopsis thaliana
 TCP
MA1290.1 TCP17 Arabidopsis thaliana
 TCP
MA1291.1 TCP7 Arabidopsis thaliana
 TCP
MA1292.1 MYB27 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA1292.2 MYB27 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA1293.1 MYB57 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA1293.2 MYB57 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA1294.1 MYB62 Arabidopsis thaliana
 Tryptophan cluster factors MYB
MA1294.2 MYB62 Arabidopsis thaliana
 Tryptophan cluster factors MYB
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.