Search profile(s)

  1. Home
  2. Search

236 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA1840.2 gcm Drosophila melanogaster
 GCM domain factors GCM
MA2005.1 NAC016 Arabidopsis thaliana
 GCM domain factors NAC
MA2005.2 NAC016 Arabidopsis thaliana
 GCM domain factors NAC
MA2006.1 NAC020 Arabidopsis thaliana
 GCM domain factors NAC
MA2006.2 NAC020 Arabidopsis thaliana
 GCM domain factors NAC
MA2009.1 NAC010 Arabidopsis thaliana
 GCM domain factors NAC
MA2009.2 NAC010 Arabidopsis thaliana
 GCM domain factors NAC
MA2010.1 SMB Arabidopsis thaliana
 GCM domain factors NAC
MA2010.2 SMB Arabidopsis thaliana
 GCM domain factors NAC
MA2015.1 NAC002 Arabidopsis thaliana
 GCM domain factors NAC
Showing 10 profiles of page 17 from 24 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.