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2470 profile(s) found

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ID Name Species Class Family Logo
MA1695.1 ARF36 Zea mays
 B3 ARF
MA1695.2 ARF36 Zea mays
 B3 ARF
MA1696.1 ARF39 Zea mays
 B3 ARF
MA1696.2 ARF39 Zea mays
 B3 ARF
MA1697.1 ARF4 Zea mays
 B3 ARF
MA1697.2 ARF4 Zea mays
 B3 ARF
MA1698.1 ARF7 Zea mays
 B3 ARF
MA1698.2 ARF7 Zea mays
 B3 ARF
MA1699.2 ceh-38 Caenorhabditis elegans
 Homeo domain factors HD-CUT
MA1704.1 zip-8 Caenorhabditis elegans
 Basic leucine zipper factors (bZIP) Jun-related
Showing 10 profiles of page 187 from 247 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.