Search profile(s)

  1. Home
  2. Search

23 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA0745.2 SNAI2 Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0745.3 SNAI2 Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0843.1 TEF Homo sapiens
 Basic leucine zipper factors (bZIP) CEBP-related
MA0843.2 TEF Homo sapiens
 Basic leucine zipper factors (bZIP) CEBP-related
MA1045.1 NAC043 Arabidopsis thaliana
 GCM domain factors NAC
MA1045.2 NAC043 Arabidopsis thaliana
 GCM domain factors NAC
MA1111.1 NR2F2 Homo sapiens
 Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA1111.2 NR2F2 Homo sapiens
 Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA1537.1 NR2F1 Homo sapiens
 Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA1537.2 NR2F1 Homo sapiens
 Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
Showing 10 profiles of page 2 from 3 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.