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ID Name Species Class Family Logo
MA2471.1 SPCH Arabidopsis thaliana
 Basic helix-loop-helix factors (bHLH) bHLH
MA2472.1 AT3G12910 Arabidopsis thaliana
 GCM domain factors NAC
MA2474.1 HMGB10 Arabidopsis thaliana
 Homeo domain factors ARID
MA2476.1 KNAT7 Arabidopsis thaliana
 Homeo domain factors TALE-type HD
MA2477.1 NGA4 Arabidopsis thaliana
 B3 RAV
MA2478.1 PK13314.1 Cannabis sativa
 TCP
MA2479.1 TCX5 Arabidopsis thaliana
 CPP
MA2481.1 PK12011.1 Cannabis sativa
 Tryptophan cluster factors MYB
MA2482.1 PK27693.1 Cannabis sativa
MA2483.1 PK20543.1 Cannabis sativa
 Tryptophan cluster factors Trihelix
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.