Search profile(s)

  1. Home
  2. Search

2470 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA2484.1 Dmrtb1 Mus musculus
 DM-type intertwined zinc finger factors DMRT factors
MA2486.1 Fosb Mus musculus
 Basic leucine zipper factors (bZIP) Fos-related
MA2492.1 ZNF18 Homo sapiens
 C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2498.1 LSH1 Arabidopsis thaliana
 HC3 zinc ribbon factors ALOG
MA2499.1 LSH2 Arabidopsis thaliana
 HC3 zinc ribbon factors
MA2500.1 LSH3 Arabidopsis thaliana
 HC3 zinc ribbon factors
MA2502.1 TMF Arabidopsis thaliana
 HC3 zinc ribbon factors
MA2503.1 Banp Mus musculus
 ARID ARID-related
MA2504.1 BCL11A Homo sapiens
 C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA2505.1 bZIP59 Arabidopsis thaliana
 Basic leucine zipper factors (bZIP) bZIP
Showing 10 profiles of page 230 from 247 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.