Search profile(s)

  1. Home
  2. Search

2470 profile(s) found

Display profiles
ID Name Species Class Family Logo
MA2604.1 dof22 Zea mays
 Other C4 zinc finger-type factors DOF
MA2605.1 mybr26 Zea mays
 Tryptophan cluster factors MYB-related
MA2606.1 mybr43 Zea mays
 Tryptophan cluster factors MYB-related
MA2607.1 tcptf23 Zea mays
 TCP
MA2608.1 glk53 Zea mays
 Tryptophan cluster factors GARP_G2-like
MA2609.1 ereb172 Zea mays
 AP2/EREBP ERF/DREB
MA2610.1 ereb97 Zea mays
 AP2/EREBP ERF/DREB
MA2611.1 ereb209 Zea mays
 AP2/EREBP ERF/DREB
MA2612.1 ereb147 Zea mays
 AP2/EREBP ERF/DREB
MA2613.1 ereb34 Zea mays
 AP2/EREBP ERF/DREB
Showing 10 profiles of page 234 from 247 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.