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236 profile(s) found

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ID Name Species Class Family Logo
MA2742.1 SlWRKY11 Solanum lycopersicum
 GCM domain factors WRKY
MA2743.1 SlWRKY23 Solanum lycopersicum
 GCM domain factors WRKY
MA2744.1 SlWRKY40 Solanum lycopersicum
 GCM domain factors WRKY
MA2745.1 SlWRKY81 Solanum lycopersicum
 GCM domain factors WRKY
MA2749.1 TraesCS2D02G576500 Triticum aestivum
 GCM domain factors NAC
MA2754.1 wrky38 Zea mays
 GCM domain factors WRKY
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.