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2470 profile(s) found

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ID Name Species Class Family Logo
MA2753.1 cpp8 Zea mays
 CPP
MA2754.1 wrky38 Zea mays
 GCM domain factors WRKY
MA2755.1 hsftf24 Zea mays
 Heat shock factors HSF
MA2756.1 dfo23 Zea mays
 Other C4 zinc finger-type factors DOF
MA2757.1 pbf1 Zea mays
 Other C4 zinc finger-type factors DOF
MA2758.1 ereb122 Zea mays
 AP2/EREBP ERF/DREB
MA2759.1 ereb7 Zea mays
 AP2/EREBP ERF/DREB
MA2760.1 p2 Zea mays
 Tryptophan cluster factors MYB
MA2761.1 myb100 Zea mays
 Tryptophan cluster factors MYB
MA2762.1 myb53 Zea mays
 Tryptophan cluster factors MYB
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.